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Neut_0044 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0044" - PFAM: protein of unknown function DUF156 in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0044PFAM- protein of unknown function DUF156; KEGG- cps-CPS_4323 hypothetical protein (108 aa)    
Predicted Functional Partners:
Neut_0043
TIGRFAM- cation diffusion facilitator family transporter; PFAM- cation efflux protein; KEGG- pae-PA1297 probable metal transporter (310 aa)
 
   
  0.919
Neut_1385
PFAM- Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG- neu-NE0907 alcohol dehydrogenase class III and related dehydrogenases; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily (368 aa)
   
   
  0.559
Neut_2313
PFAM- copper resistance D domain protein; KEGG- neu-NE2058 cytochrome c, class IC-cytochrome c, class I (714 aa)
         
  0.429
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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