• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0052 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0052" - KEGG: bbr:BB1386 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0052KEGG- bbr-BB1386 hypothetical protein (754 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family (391 aa)
          0.803
Neut_0053
KEGG- ppu-PP5391 hypothetical protein (162 aa)
              0.688
Neut_0051
Uncharacterized protein; KEGG- bpa-BPP1578 putative cytochrome (159 aa)
              0.682
Neut_0050
PFAM- protein of unknown function DUF411; KEGG- rme-Rmet_6118 protein of unknown function DUF411 (138 aa)
              0.533
Neut_1974
PFAM- short-chain dehydrogenase/reductase SDR; KEGG- neu-NE1333 short-chain dehydrogenase/reductase (SDR) superfamily; Belongs to the short-chain dehydrogenases/reductases (SDR) family (272 aa)
   
          0.432
Neut_0054
PFAM- cytochrome c biogenesis protein, transmembrane region; KEGG- jan-Jann_2398 cytochrome c biogenesis protein, transmembrane protein (248 aa)
              0.430
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (7%) [HD]