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STRINGSTRING
Neut_0078 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0078" - annotation not available in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0078annotation not available (189 aa)    
Predicted Functional Partners:
Neut_0079
PFAM- DNA repair protein RadC; KEGG- eba-ebA2402 DNA repair protein similar to RadC-family (167 aa)
              0.536
Neut_0077
PFAM- protein of unknown function DUF1525; KEGG- bxe-Bxe_A1181 hypothetical protein (143 aa)
              0.502
Neut_0076
PFAM- protein of unknown function DUF1527; KEGG- rme-Rmet_2357 protein of unknown function DUF1527 (310 aa)
              0.502
Neut_0075
KEGG- xcb-XC_2026 hypothetical protein (465 aa)
              0.479
Neut_0074
KEGG- xcb-XC_2025 hypothetical protein (114 aa)
              0.479
Neut_1458
KEGG- hch-HCH_05652 hypothetical protein (236 aa)
   
          0.470
Neut_1983
PFAM- histone family protein nucleoid-structuring protein H-NS; KEGG- neu-NE1339 H-NS histone family (100 aa)
   
          0.465
Neut_0073
KEGG- xcv-XCV2360 hypothetical protein (501 aa)
              0.465
Neut_0080
KEGG- xcv-XCV2366 hypothetical protein (250 aa)
 
          0.405
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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