STRINGSTRING
Neut_0082 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0082" - Disulfide bond formation protein DsbB in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0082Disulfide bond formation protein DsbB (149 aa)    
Predicted Functional Partners:
Neut_0081
DSBA oxidoreductase (219 aa)
 
          0.978
Neut_0083
Hypothetical protein (164 aa)
              0.709
Neut_0845
Redoxin domain-containing protein (181 aa)
 
 
  0.705
Neut_1245
Redoxin domain-containing protein (154 aa)
 
 
  0.697
rpoH
RNA polymerase factor sigma-32 (280 aa)
       
      0.651
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (749 aa)
       
      0.651
Neut_2478
Thioredoxin (108 aa)
   
 
  0.649
Neut_2281
Thioredoxin (78 aa)
   
 
  0.648
Neut_2179
Hypothetical protein (190 aa)
   
 
  0.648
Neut_1637
Periplasmic protein thiol--disulfide oxidoreductase DsbE (174 aa)
   
 
  0.648
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (8%) [HD]