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Neut_0117 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0117" - PFAM: single-strand binding protein/Primosomal replication protein n in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0117PFAM- single-strand binding protein/Primosomal replication protein n; KEGG- eba-ebB77 single-strand DNA-binding protein (133 aa)    
Predicted Functional Partners:
Neut_0119
KEGG- rme-Rmet_2295 hypothetical protein (266 aa)
 
        0.953
Neut_0118
KEGG- xcv-XCV2408 hypothetical protein (175 aa)
 
     
  0.949
Neut_0121
KEGG- xfa-XF1782 hypothetical protein (186 aa)
 
        0.884
Neut_0120
KEGG- rme-Rmet_2294 hypothetical protein (391 aa)
 
        0.884
Neut_0122
KEGG- rme-Rmet_2292 hypothetical protein (547 aa)
 
   
  0.873
Neut_0124
PFAM- Cobyrinic acid a,c-diamide synthase; KEGG- bxe-Bxe_A1230 putative chromosome partitioning protein ParA (286 aa)
 
        0.863
Neut_0123
KEGG- eba-ebA2468 hypothetical protein (86 aa)
 
          0.862
Neut_0116
KEGG- rme-Rmet_2298 DNA topoisomerase III; TIGRFAM- DNA topoisomerase III; PFAM- TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein; SMART- DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein (671 aa)
 
 
  0.852
Neut_0126
KEGG- xfa-XF1787 hypothetical protein (249 aa)
 
          0.830
Neut_0073
KEGG- xcv-XCV2360 hypothetical protein (501 aa)
   
        0.809
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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