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Neut_0125 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0125" - Phage transcriptional regulator, AlpA in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Neut_0125Phage transcriptional regulator, AlpA; PFAM- Prophage CP4-57 regulatory; KEGG- xcv-XCV2415 putative regulatory protein, AlpA family (70 aa)    
Predicted Functional Partners:
Neut_0123
KEGG- eba-ebA2468 hypothetical protein (86 aa)
 
          0.924
Neut_0120
KEGG- rme-Rmet_2294 hypothetical protein (391 aa)
 
          0.918
Neut_0121
KEGG- xfa-XF1782 hypothetical protein (186 aa)
 
          0.916
Neut_0122
KEGG- rme-Rmet_2292 hypothetical protein (547 aa)
 
          0.915
Neut_0124
PFAM- Cobyrinic acid a,c-diamide synthase; KEGG- bxe-Bxe_A1230 putative chromosome partitioning protein ParA (286 aa)
 
     
  0.906
Neut_0126
KEGG- xfa-XF1787 hypothetical protein (249 aa)
 
          0.888
Neut_0118
KEGG- xcv-XCV2408 hypothetical protein (175 aa)
 
          0.834
Neut_0117
PFAM- single-strand binding protein/Primosomal replication protein n; KEGG- eba-ebB77 single-strand DNA-binding protein (133 aa)
 
     
  0.803
Neut_0119
KEGG- rme-Rmet_2295 hypothetical protein (266 aa)
 
          0.790
Neut_0006
PFAM- phage integrase family protein; KEGG- xfa-XF1718 phage-related integrase; Belongs to the ’phage’ integrase family (617 aa)
 
     
  0.762
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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