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Neut_0125 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0125" - Phage transcriptional regulator, AlpA in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0125Phage transcriptional regulator, AlpA (70 aa)    
Predicted Functional Partners:
Neut_0120
Hypothetical protein (391 aa)
 
          0.937
Neut_0121
Hypothetical protein (186 aa)
 
          0.934
Neut_0122
Hypothetical protein (547 aa)
 
          0.933
Neut_0124
Cobyrinic acid a,c-diamide synthase (286 aa)
 
          0.900
Neut_0126
Hypothetical protein (249 aa)
 
          0.887
Neut_0118
Hypothetical protein (175 aa)
 
          0.823
Neut_0117
Single-stranded DNA-binding protein (133 aa)
 
          0.818
Neut_0119
Hypothetical protein (266 aa)
 
          0.800
Neut_0123
Hypothetical protein (86 aa)
              0.795
Neut_0006
Phage integrase family protein (617 aa)
 
          0.736
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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