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Neut_0136 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0136" - Periplasmic sensor signal transduction histidine kinase in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Neut_0136Periplasmic sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG- neu-NE0015 sensory transduction histidine kinases (499 aa)    
Predicted Functional Partners:
Neut_0138
Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM- response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART- AAA ATPase; KEGG- neu-NE0017 putative transcriptional regulator of two-component regulator protein (455 aa)
 
  0.978
Neut_0137
KEGG- neu-NE0016 hypothetical protein (179 aa)
   
 
  0.867
Neut_2386
PFAM- response regulator receiver; KEGG- neu-NE1007 response regulator receiver domain (121 aa)
 
      0.838
Neut_2303
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (487 aa)
     
 
  0.818
Neut_1564
Two component transcriptional regulator, winged helix family; PFAM- response regulator receiver; transcriptional regulator domain protein; KEGG- neu-NE0344 possible response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding (223 aa)
 
      0.719
Neut_2082
Two component transcriptional regulator, winged helix family; TIGRFAM- phosphate regulon transcriptional regulatory protein PhoB; PFAM- response regulator receiver; transcriptional regulator domain protein; KEGG- neu-NE2131 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding (240 aa)
 
      0.717
Neut_1130
PFAM- response regulator receiver; KEGG- neu-NE1836 response regulator receiver domain (132 aa)
 
      0.666
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (341 aa)
     
      0.650
Neut_0040
TIGRFAM- heavy metal response regulator; PFAM- response regulator receiver; transcriptional regulator domain protein; KEGG- bbr-BB4471 two-component response regulator (231 aa)
      0.621
trpC
PFAM- Indole-3-glycerol phosphate synthase; KEGG- neu-NE0012 indole-3-glycerol phosphate synthase; Belongs to the TrpC family (306 aa)
     
      0.613
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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