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Neut_0138 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0138" - Fis family two component sigma-54-specific transcriptional regulator in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0138Fis family two component sigma-54-specific transcriptional regulator (455 aa)    
Predicted Functional Partners:
Neut_0136
Periplasmic sensor signal transduction histidine kinase (499 aa)
 
 
  0.991
Neut_2303
RNA polymerase sigma 54 subunit RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (487 aa)
 
   
  0.988
Neut_0137
Hypothetical protein (179 aa)
              0.810
Neut_0388
Periplasmic sensor signal transduction histidine kinase (724 aa)
 
   
  0.806
Neut_1231
Glutamine synthetase, type I (468 aa)
   
   
  0.760
Neut_0960
Sensor signal transduction histidine kinase (438 aa)
 
 
  0.718
Neut_0598
Diguanylate cyclase (491 aa)
   
 
  0.677
Neut_1162
CheA signal transduction histidine kinase (1716 aa)
   
   
  0.641
Neut_0778
DNA polymerase I (906 aa)
     
   
  0.623
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
         
  0.619
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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