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Neut_0139 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0139" - PFAM: PDZ/DHR/GLGF domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0139PFAM- PDZ/DHR/GLGF domain protein; KEGG- neu-NE0018 PDZ domain (also known as DHR or GLGF) (448 aa)    
Predicted Functional Partners:
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1300 aa)
   
        0.913
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
   
  0.879
Neut_2522
PFAM- porin, Gram-negative type; KEGG- neu-NE2563 general diffusion gram-negative porins (413 aa)
   
 
  0.671
Neut_1784
KEGG- neu-NE2330 sigma-E factor negative regulatory protein RseA (191 aa)
 
 
  0.569
Neut_1916
TIGRFAM- TonB-dependent vitamin B12 receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE0636 TonB-dependent receptor protein (612 aa)
 
   
  0.556
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
     
   
  0.552
Neut_0420
PFAM- response regulator receiver; KEGG- neu-NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL) (180 aa)
   
        0.526
Neut_1424
KEGG- neu-NE1130 hypothetical protein (408 aa)
   
 
  0.518
Neut_1271
KEGG- neu-NE1856 hypothetical protein (496 aa)
   
      0.505
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
 
      0.499
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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