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Neut_0155 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0155" - dTDP-4-dehydrorhamnose reductase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0155dTDP-4-dehydrorhamnose reductase; PFAM- NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG- bpm-BURPS1710b_3295 WcbJ (288 aa)    
Predicted Functional Partners:
Neut_0156
PFAM- NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG- cjr-CJE1611 GDP-mannose 4,6-dehydratase (343 aa)
 
     
  0.867
Neut_0153
Uncharacterized protein; KEGG- cch-Cag_1481 glycosyltransferase-like (1186 aa)
   
        0.823
Neut_0157
PFAM- GHMP kinase; GHMP kinase, C terminal domain protein; KEGG- bpm-BURPS1710b_3292 WcbL (343 aa)
 
     
  0.779
Neut_0152
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0483 probable ATPase component ABC-type polysaccharide/polyol phosphate transport system (437 aa)
   
   
  0.775
Neut_0154
PFAM- Methyltransferase type 11; KEGG- bca-BCE0301 hypothetical protein (350 aa)
              0.770
Neut_0159
PFAM- Nucleotidyl transferase; KEGG- bpm-BURPS1710b_3290 WcbM (228 aa)
 
   
  0.728
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (194 aa)
 
     
  0.719
Neut_0160
TIGRFAM- D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG- bps-BPSL2793 putative D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (185 aa)
 
     
  0.703
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
   
   
  0.601
Neut_1857
KEGG- mca-MCA1000 hypothetical protein (276 aa)
   
          0.552
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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