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STRINGSTRING
Neut_0163 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0163" - PFAM: PilT protein domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0163PFAM- PilT protein domain protein; KEGG- noc-Noc_0062 PilT-like protein (179 aa)    
Predicted Functional Partners:
Neut_0162
KEGG- noc-Noc_0061 hypothetical protein (119 aa)
              0.854
Neut_0161
KEGG- noc-Noc_0060 ATP-binding region, ATPase-like (290 aa)
              0.808
Neut_0160
TIGRFAM- D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG- bps-BPSL2793 putative D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (185 aa)
              0.644
Neut_0159
PFAM- Nucleotidyl transferase; KEGG- bpm-BURPS1710b_3290 WcbM (228 aa)
              0.644
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (194 aa)
              0.644
Neut_0157
PFAM- GHMP kinase; GHMP kinase, C terminal domain protein; KEGG- bpm-BURPS1710b_3292 WcbL (343 aa)
              0.644
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
           
  0.562
Neut_0156
PFAM- NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG- cjr-CJE1611 GDP-mannose 4,6-dehydratase (343 aa)
              0.527
Neut_0676
KEGG- sfx-S2719 putative stabilization protein (62 aa)
     
 
  0.514
ABI58948.1
KEGG- sfx-S2719 putative stabilization protein (62 aa)
     
 
  0.514
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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