• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0166 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0166" - PFAM: glycosyl transferase, family 2 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0166PFAM- glycosyl transferase, family 2; KEGG- pfl-PFL_5496 glycosyl transferase, group 2 family protein (314 aa)    
Predicted Functional Partners:
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
   
   
  0.902
Neut_0165
TIGRFAM- 3’(2’),5’-bisphosphate nucleotidase; PFAM- inositol monophosphatase; KEGG- ilo-IL0573 3’-phosphoadenosine 5’-phosphosulfate (PAPS) 3’-phosphatase (272 aa)
 
          0.805
Neut_0152
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0483 probable ATPase component ABC-type polysaccharide/polyol phosphate transport system (437 aa)
 
     
  0.665
Neut_0146
Transport permease protein; PFAM- ABC-2 type transporter; KEGG- neu-NE0472 ABC 2 transport system integral membrane protein (272 aa)
 
   
  0.636
Neut_0618
Mannose-6-phosphate isomerase, type 2; KEGG- neu-NE2250 putative mannose-1-phosphate guanylyltransferase; TIGRFAM- mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM- mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein (483 aa)
   
 
  0.615
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate (565 aa)
   
        0.586
Neut_1549
N-acetylneuraminate synthase; PFAM- CBS domain containing protein; Xylose isomerase domain protein TIM barrel; N-acetylneuraminic acid synthase, N-terminal domain; KEGG- neu-NE1570 type III antifreeze protein-CBS domain-NeuB family (749 aa)
   
   
  0.546
Neut_2401
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family (295 aa)
 
   
  0.536
Neut_2244
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (181 aa)
 
   
  0.524
Neut_2400
TIGRFAM- dTDP-glucose 4,6-dehydratase; PFAM- NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG- nmu-Nmul_A0264 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily (353 aa)
 
   
  0.458
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (7%) [HD]