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STRINGSTRING
Neut_0190 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0190" - KEGG: neu:NE0044 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0190KEGG- neu-NE0044 hypothetical protein (265 aa)    
Predicted Functional Partners:
Neut_0189
PFAM- OmpA/MotB domain protein; KEGG- neu-NE0045 bacterial outer membrane protein (314 aa)
 
          0.888
Neut_0188
KEGG- neu-NE0046 probable chemotaxis (motility protein A) transmembrane (286 aa)
 
          0.742
Neut_0972
KEGG- nmu-Nmul_A1168 hypothetical protein (167 aa)
     
        0.635
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor (329 aa)
         
  0.587
Neut_0659
PFAM- protein of unknown function DUF1058; KEGG- neu-NE2209 hypothetical protein (159 aa)
   
          0.574
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (256 aa)
   
   
  0.569
Neut_0313
KEGG- neu-NE0281 hypothetical protein (195 aa)
   
          0.547
Neut_2300
PFAM- protein of unknown function DUF1239; KEGG- neu-NE0065 hypothetical protein (193 aa)
   
          0.497
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (519 aa)
 
          0.479
ycgR
Flagellar brake protein YcgR; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (269 aa)
   
          0.477
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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