• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0226 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0226" - PFAM: UDP-glucose/GDP-mannose dehydrogenase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0226PFAM- UDP-glucose/GDP-mannose dehydrogenase; KEGG- neu-NE2276 UDP-glucose/GDP-mannose dehydrogenase family; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (424 aa)    
Predicted Functional Partners:
Neut_0225
PFAM- NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG- neu-NE2277 NAD dependent epimerase/dehydratase family (335 aa)
 
 
  0.955
Neut_0619
PFAM- UDP-N-acetylglucosamine 2-epimerase; KEGG- neu-NE2249 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family (370 aa)
   
  0.949
Neut_0698
KEGG- dar-Daro_1735 UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal type; TIGRFAM- UTP-glucose-1-phosphate uridylyltransferase; PFAM- Nucleotidyl transferase (295 aa)
       
  0.924
Neut_2400
TIGRFAM- dTDP-glucose 4,6-dehydratase; PFAM- NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG- nmu-Nmul_A0264 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily (353 aa)
 
   
  0.657
Neut_2112
PFAM- glycosyl transferase, group 1; KEGG- neu-NE2266 glycosyl transferase group 1 (390 aa)
 
   
  0.654
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
         
  0.533
Neut_0186
Polysaccharide biosynthesis protein CapD; PFAM- NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG- neu-NE0502 polysaccharide biosynthesis protein CapD type (660 aa)
   
  0.508
Neut_2113
PFAM- glycosyl transferase, group 1; KEGG- neu-NE2267 glycosyl transferase group 1 (375 aa)
 
   
  0.492
Neut_1762
PFAM- sugar transferase; KEGG- neu-NE0378 bacterial sugar transferase (423 aa)
   
   
  0.485
Neut_1042
PFAM- NAD-dependent epimerase/dehydratase; KEGG- neu-NE0595 putative oxidoreductase protein (301 aa)
   
 
  0.481
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (10%) [HD]