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Neut_0257 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0257" - Transcriptional antiterminator, Rof in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0257Transcriptional antiterminator, Rof; PFAM- Modulator of Rho-dependent transcription termination; KEGG- neu-NE0186 hypothetical protein (89 aa)    
Predicted Functional Partners:
Neut_0256
Uncharacterized protein; KEGG- eba-p1B280 transposase (134 aa)
              0.548
Neut_1033
KEGG- neu-NE0586 hypothetical protein (464 aa)
   
          0.538
Neut_2062
KEGG- neu-NE0458 hypothetical protein (698 aa)
   
          0.532
Neut_0439
KEGG- neu-NE1680 hypothetical protein (85 aa)
 
          0.521
Neut_1447
KEGG- neu-NE1157 hypothetical protein (287 aa)
   
          0.520
Neut_1213
KEGG- neu-NE0879 esterase/lipase/thioesterase family active site-lipase (class 3) (388 aa)
   
          0.518
Neut_0313
KEGG- neu-NE0281 hypothetical protein (195 aa)
   
          0.484
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (419 aa)
       
      0.447
Neut_1361
Periplasmic sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG- neu-NE1408 sensory transduction histidine kinases (445 aa)
   
          0.436
Neut_2085
PFAM- Peptidoglycan-binding domain 1 protein; KEGG- neu-NE2133 putative peptidoglycan binding domain 1 (194 aa)
   
          0.422
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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