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STRINGSTRING
Neut_0266 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0266" - PFAM: fatty acid desaturase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0266PFAM- fatty acid desaturase; KEGG- neu-NE0177 fatty acid desaturase, type 2 (355 aa)    
Predicted Functional Partners:
Neut_0267
KEGG- neu-NE0176 hypothetical protein (147 aa)
 
        0.950
Neut_0268
PFAM- Nucleotidyl transferase; KEGG- neu-NE0175 ADP-glucose pyrophosphorylase (268 aa)
 
          0.891
Neut_1104
KEGG- neu-NE0803 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (405 aa)
   
     
  0.760
Neut_0902
KEGG- neu-NE1794 hypothetical protein (335 aa)
   
          0.741
Neut_1106
KEGG- neu-NE0805 hypothetical protein (322 aa)
   
          0.725
Neut_1105
PFAM- diacylglycerol kinase, catalytic region; KEGG- neu-NE0804 DAG-kinase catalytic domain (presumed) (333 aa)
 
          0.702
Neut_0265
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily (236 aa)
              0.693
Neut_1100
KEGG- neu-NE0799 hypothetical protein (385 aa)
 
        0.648
Neut_0269
PFAM- aminotransferase, class V; KEGG- neu-NE0174 aminotransferase class-V (386 aa)
              0.636
Neut_1053
KEGG- neu-NE0783 hypothetical protein (579 aa)
   
          0.631
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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