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STRINGSTRING
Neut_0269 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0269" - PFAM: aminotransferase, class V in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0269PFAM- aminotransferase, class V; KEGG- neu-NE0174 aminotransferase class-V (386 aa)    
Predicted Functional Partners:
Neut_1237
TIGRFAM- SUF system FeS assembly protein, NifU family; PFAM- nitrogen-fixing NifU domain protein; KEGG- neu-NE1446 NifU-like N terminal domain (160 aa)
 
 
  0.999
Neut_1243
TIGRFAM- putative transcriptional regulator, Rrf2 family; PFAM- protein of unknown function UPF0074; KEGG- neu-NE1452 hypothetical protein (155 aa)
 
   
  0.976
Neut_0916
[sulfur carrier protein ThiS] adenylyltransferase; PFAM- UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG- neu-NE1783 NAD binding site-UBA/THIF-type NAD/FAD binding fold (253 aa)
   
  0.850
Neut_1041
PFAM- ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG- neu-NE0594 CDP-6-deoxy-delta-3,4-glucoseen reductase (348 aa)
   
 
  0.837
Neut_1236
PFAM- nitrogen-fixing NifU domain protein; KEGG- neu-NE1445 nitrogen-fixing protein NifU (186 aa)
 
 
  0.727
Neut_0268
PFAM- Nucleotidyl transferase; KEGG- neu-NE0175 ADP-glucose pyrophosphorylase (268 aa)
              0.705
Neut_0267
KEGG- neu-NE0176 hypothetical protein (147 aa)
   
        0.685
Neut_1282
KEGG- neu-NE1513 hypothetical protein (159 aa)
   
 
  0.650
Neut_1242
TIGRFAM- iron-sulfur cluster assembly accessory protein; PFAM- HesB/YadR/YfhF-family protein; KEGG- neu-NE1451 hypothetical HesB/YadR/YfhF family; Belongs to the HesB/IscA family (109 aa)
 
   
  0.641
dnaK
Chaperone protein DnaK; Acts as a chaperone (647 aa)
 
 
  0.637
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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