• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0287 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0287" - Cell division and transport-associated protein TolR in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0287Cell division and transport-associated protein TolR; PFAM- Biopolymer transport protein ExbD/TolR; KEGG- neu-NE0216 biopolymer transport protein ExbD/TolR; TC 2.C.1.2.1 (138 aa)    
Predicted Functional Partners:
Neut_0286
Cell division and transport-associated protein TolQ; PFAM- MotA/TolQ/ExbB proton channel; KEGG- neu-NE0215 MotA/TolQ/ExbB proton channel family; TC 2.C.1.2.1 (234 aa)
 
 
  0.994
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (423 aa)
 
 
  0.948
Neut_0285
TIGRFAM- 4-hydroxybenzoyl-CoA thioesterase; PFAM- thioesterase superfamily protein; KEGG- neu-NE0214 4-hydroxybenzoyl-CoA thioesterase family active site (137 aa)
 
   
  0.919
Neut_0288
Cell division and transport-associated protein TolA; KEGG- neu-NE0217 proline-rich region; TC 2.C.1.2.1 (298 aa)
   
 
  0.910
Neut_1616
Outer membrane transport energization protein ExbB; PFAM- MotA/TolQ/ExbB proton channel; KEGG- neu-NE0353 MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1 (265 aa)
 
 
  0.894
Neut_0290
PFAM- OmpA/MotB domain protein; KEGG- neu-NE0219 bacterial outer membrane protein; Belongs to the ompA family (173 aa)
 
 
 
  0.863
cpoB
Cell division coordinator CpoB; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division (273 aa)
 
   
  0.766
ruvB
Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing (346 aa)
   
        0.758
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (194 aa)
              0.721
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (178 aa)
              0.719
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (7%) [HD]