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STRINGSTRING
Neut_0326 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0326" - KEGG: neu:NE0296 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0326KEGG- neu-NE0296 hypothetical protein (510 aa)    
Predicted Functional Partners:
Neut_0325
PFAM- protein of unknown function DUF785; KEGG- neu-NE0295 hypothetical protein (195 aa)
 
          0.964
Neut_0327
TIGRFAM- alpha-L-glutamate ligase-like protein; KEGG- neu-NE0297 hypothetical protein (301 aa)
 
        0.933
Neut_0457
PFAM- ErfK/YbiS/YcfS/YnhG family protein; KEGG- neu-NE1659 hypothetical protein (323 aa)
   
          0.519
Neut_0324
TIGRFAM- thiamine biosynthesis protein ThiS; PFAM- thiamineS protein; KEGG- neu-NE0285 DUF170 (66 aa)
              0.497
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S (268 aa)
              0.401
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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