STRINGSTRING
Neut_0405 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0405" - Putative lipoprotein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0405Putative lipoprotein (200 aa)    
Predicted Functional Partners:
Neut_0406
Hypothetical protein (301 aa)
 
          0.977
Neut_2236
Hypothetical protein (381 aa)
 
          0.866
Neut_2235
ABC transporter-like protein (260 aa)
 
          0.779
Neut_0407
Inositol-phosphate phosphatase (275 aa)
              0.771
Neut_2367
Putative lipoprotein (193 aa)
   
          0.737
Neut_2381
Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS) (102 aa)
   
          0.691
Neut_0855
Anti-sigma-factor antagonist (104 aa)
   
          0.658
trmJ
RNA methyltransferase; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (248 aa)
              0.591
Neut_0389
Putative proline rich signal peptide protein (201 aa)
   
          0.589
Neut_2282
Hypothetical protein (182 aa)
   
          0.580
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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