STRINGSTRING
Neut_0406 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0406" - Hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0406Hypothetical protein (301 aa)    
Predicted Functional Partners:
Neut_2236
Hypothetical protein (381 aa)
 
  0.988
Neut_2235
ABC transporter-like protein (260 aa)
 
  0.982
Neut_0405
Putative lipoprotein (200 aa)
 
          0.977
Neut_0852
Hypothetical protein (265 aa)
   
  0.952
Neut_0854
Toluene tolerance family protein (205 aa)
   
 
  0.925
Neut_0851
ABC transporter-like protein (271 aa)
   
  0.924
Neut_0855
Anti-sigma-factor antagonist (104 aa)
 
   
    0.903
Neut_1574
Toluene tolerance family protein (193 aa)
         
    0.800
Neut_0853
Hypothetical protein (159 aa)
         
    0.800
Neut_0407
Inositol-phosphate phosphatase (275 aa)
              0.771
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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