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Neut_0414 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0414" - PFAM: MscS Mechanosensitive ion channel in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0414PFAM- MscS Mechanosensitive ion channel; KEGG- neu-NE1947 hypothetical protein (1114 aa)    
Predicted Functional Partners:
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (476 aa)
         
  0.563
Neut_0977
KEGG- neu-NE1275 hypothetical protein (228 aa)
   
          0.563
Neut_2116
KEGG- neu-NE2270 hypothetical protein (326 aa)
   
          0.546
Neut_2228
CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (95 aa)
   
          0.539
Neut_0178
KEGG- neu-NE0494 hypothetical protein (111 aa)
   
          0.511
Neut_2219
CRISPR-associated protein, Csm4 family; KEGG- neu-NE0120 hypothetical protein (322 aa)
   
          0.507
Neut_0906
KEGG- neu-NE1790 hypothetical protein (373 aa)
   
          0.504
Neut_2220
TIGRFAM- CRISPR-associated RAMP protein, Csm5 family; KEGG- neu-NE0119 hypothetical protein (533 aa)
   
          0.484
Neut_2225
TIGRFAM- CRISPR-associated protein, NE0113 family; KEGG- neu-NE0113 hypothetical protein (376 aa)
   
          0.483
Neut_2051
KEGG- neu-NE1735 putative sulfonate binding protein precursor (358 aa)
   
          0.467
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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