STRINGSTRING
Neut_0428 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0428" - Putative transmembrane protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0428Putative transmembrane protein (215 aa)    
Predicted Functional Partners:
Neut_0427
Glucokinase (335 aa)
              0.819
Neut_1023
Putative lipase (105 aa)
   
          0.680
Neut_1871
Hypothetical protein (122 aa)
   
          0.619
Neut_1361
Periplasmic sensor signal transduction histidine kinase (445 aa)
   
          0.535
Neut_0849
SH3 type 3 domain-containing protein (227 aa)
   
          0.483
Neut_1833
Putative type 4 fimbrial biogenesis protein PilY1 (1143 aa)
   
          0.435
Neut_0405
Putative lipoprotein (200 aa)
   
          0.415
Neut_1832
Fimbrial protein pilin (149 aa)
   
          0.408
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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