STRINGSTRING
Neut_0463 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0463" - Zinc/iron permease in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0463Zinc/iron permease (270 aa)    
Predicted Functional Partners:
Neut_0462
Hypothetical protein (252 aa)
              0.682
Neut_1398
Hypothetical protein (155 aa)
   
          0.620
Neut_1397
ABC transporter-like protein (772 aa)
   
        0.559
Neut_1767
Outer membrane efflux protein (417 aa)
   
          0.538
Neut_2343
Peptidase M16 domain-containing protein (433 aa)
   
        0.516
Neut_0198
Type I secretion outer membrane protein, TolC family protein (440 aa)
   
        0.515
Neut_0460
Phosphopantetheine-binding (84 aa)
 
          0.490
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (164 aa)
   
          0.479
Neut_1530
Peptidase M16 domain-containing protein (463 aa)
   
        0.475
Neut_0288
Hypothetical protein (298 aa)
   
          0.472
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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