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STRINGSTRING
Neut_0487 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0487" - TIGRFAM: channel protein, hemolysin III family in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0487TIGRFAM- channel protein, hemolysin III family; PFAM- Hly-III family protein; KEGG- tbd-Tbd_2707 hemolysin-like protein (219 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
     
 
  0.537
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
         
  0.504
Neut_0642
Integral membrane protein TerC; PFAM- CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG- neu-NE2227 CBS domain (520 aa)
         
  0.483
Neut_0488
KEGG- plt-Plut_0890 hypothetical protein (100 aa)
              0.444
Neut_2470
Urea amidolyase related protein; KEGG- neu-NE2420 biotin / lipoyl attachment-carbamoyl-phosphate synthase-DUF183; TIGRFAM- urea amidolyase related protein; PFAM- biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein (1206 aa)
   
        0.436
Neut_0489
PFAM- Transglycosylase-associated protein; KEGG- tcx-Tcr_0487 transglycosylase-associated protein (82 aa)
              0.413
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1300 aa)
              0.412
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (487 aa)
   
        0.400
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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