• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0491 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0491" - Transcriptional regulator, Crp/Fnr family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0491Transcriptional regulator, Crp/Fnr family protein; SMART- cyclic nucleotide-binding; regulatory protein, Crp; KEGG- pfl-PFL_4066 transcriptional regulator-related protein (246 aa)    
Predicted Functional Partners:
Neut_0181
PFAM- adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; Tetratricopeptide TPR_4; SMART- Tetratricopeptide domain protein; KEGG- neu-NE0090 guanylate cyclase-TPR repeat-SAM domain (sterile alpha motif) (1131 aa)
   
 
  0.746
Neut_0318
Kef-type potassium/proton antiporter, CPA2 family; PFAM- TrkA-N domain protein; sodium/hydrogen exchanger; KEGG- noc-Noc_2952 sodium/hydrogen exchanger, TrkA-N; TC 2.A.37.1; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (568 aa)
         
  0.653
Neut_1665
Glycosyltransferase 36; PFAM- putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG- dar-Daro_2046 putative carbohydrate binding-glycosyltransferase 36-glycosyltransferase 36 associated (2985 aa)
 
          0.650
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (335 aa)
     
      0.590
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (67 aa)
       
      0.583
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1404 aa)
       
 
  0.579
Neut_2433
PFAM- ROK family protein; phosphoglucose isomerase (PGI); KEGG- dra-DR1742 glucose-6-phosphate isomerase; Belongs to the GPI family (768 aa)
   
   
  0.562
Neut_1214
Uncharacterized protein; KEGG- pol-Bpro_2073 TPR repeat (195 aa)
   
 
  0.557
Neut_0219
Histidine kinase; KEGG- neu-NE0049 sensory transduction histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART- PAS domain containing protein (1221 aa)
         
  0.557
Neut_0724
PFAM- Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG- neu-NE1528 putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein (852 aa)
     
   
  0.550
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (9%) [HD]