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Neut_0504 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0504" - PFAM: SMC domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0504PFAM- SMC domain protein; ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE1613 ABC transporter, fused permease and ATPase domains (574 aa)    
Predicted Functional Partners:
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (278 aa)
              0.801
Neut_1104
KEGG- neu-NE0803 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (405 aa)
 
      0.782
Neut_1105
PFAM- diacylglycerol kinase, catalytic region; KEGG- neu-NE0804 DAG-kinase catalytic domain (presumed) (333 aa)
   
          0.741
Neut_1681
KEGG- neu-NE1504 hypothetical protein (461 aa)
   
          0.739
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
 
   
  0.716
Neut_0437
PFAM- O-antigen polymerase; KEGG- neu-NE1682 possible transmembrane protein (405 aa)
 
          0.712
Neut_1106
KEGG- neu-NE0805 hypothetical protein (322 aa)
   
          0.710
Neut_2522
PFAM- porin, Gram-negative type; KEGG- neu-NE2563 general diffusion gram-negative porins (413 aa)
   
          0.693
Neut_1663
PFAM- protein of unknown function DUF1207; KEGG- neu-NE1230 hypothetical protein (404 aa)
   
          0.693
Neut_0267
KEGG- neu-NE0176 hypothetical protein (147 aa)
   
          0.664
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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