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Neut_0540 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0540" - Restriction modification system DNA specificity subunit in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0540Restriction modification system DNA specificity subunit (422 aa)    
Predicted Functional Partners:
Neut_0541
N-6 DNA methylase (542 aa)
 
  0.998
Neut_0537
Type I site-specific deoxyribonuclease, HsdR family protein (1072 aa)
 
   
  0.968
Neut_2448
Type I restriction-modification system (92 aa)
   
 
  0.933
Neut_1942
Type I site-specific deoxyribonuclease HsdM (116 aa)
   
 
  0.930
Neut_0778
DNA polymerase I (906 aa)
       
 
  0.909
Neut_0539
Hypothetical protein (190 aa)
              0.862
Neut_0538
Hypothetical protein (302 aa)
              0.862
Neut_2505
Phage integrase family protein (421 aa)
   
   
  0.544
Neut_0680
Phage integrase family protein (400 aa)
   
   
  0.544
Neut_1755
Phage integrase family protein (393 aa)
   
   
  0.544
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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