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STRINGSTRING
Neut_0623 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0623" - UPF0234 protein Neut_0623 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0623UPF0234 protein Neut_0623; PFAM- protein of unknown function DUF520; KEGG- neu-NE2248 hypothetical protein; Belongs to the UPF0234 family (161 aa)    
Predicted Functional Partners:
Neut_0622
PFAM- protein of unknown function DUF474; KEGG- bbr-BB2497 hypothetical protein (146 aa)
              0.556
Neut_0621
PFAM- NnrS family protein; KEGG- bpa-BPP1424 putative membrane protein (407 aa)
              0.474
Neut_0620
KEGG- bbr-BB2499 hypothetical protein (134 aa)
              0.474
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (185 aa)
       
      0.438
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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