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Neut_0628 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0628" - ABC transporter-related protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0628ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE2244 ATPase component ABC-type (unclassified) transport system (238 aa)    
Predicted Functional Partners:
Neut_0629
KEGG- neu-NE2243 hypothetical protein (482 aa)
 
          0.896
Neut_0627
KEGG- neu-NE2245 hypothetical protein (257 aa)
 
   
  0.829
Neut_1341
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE0828 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (384 aa)
 
 
  0.808
Neut_2012
PFAM- protein of unknown function DUF214; KEGG- neu-NE1900 DUF214 (407 aa)
      0.798
Neut_2010
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE1898 conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (381 aa)
 
 
  0.788
Neut_1344
PFAM- protein of unknown function DUF214; KEGG- neu-NE0825 putative ABC transport system permease protein (399 aa)
      0.779
Neut_1343
PFAM- protein of unknown function DUF214; KEGG- neu-NE0826 putative ABC transport system permease protein (400 aa)
      0.774
Neut_0634
PFAM- protein of unknown function DUF214; KEGG- neu-NE2240 DUF214 (417 aa)
 
  0.740
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (449 aa)
   
   
  0.592
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (345 aa)
 
        0.576
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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