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Neut_0628 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0628" - ABC transporter-like protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0628ABC transporter-like protein (238 aa)    
Predicted Functional Partners:
Neut_2012
Hypothetical protein (407 aa)
 
  0.924
Neut_1344
Hypothetical protein (399 aa)
 
  0.919
Neut_0629
Hypothetical protein (482 aa)
 
          0.916
Neut_1343
Hypothetical protein (400 aa)
 
  0.912
Neut_0627
Hypothetical protein (257 aa)
 
          0.864
Neut_0634
Hypothetical protein (417 aa)
   
  0.846
Neut_1341
RND family efflux transporter MFP subunit (384 aa)
 
 
  0.826
Neut_2010
RND family efflux transporter MFP subunit (381 aa)
 
  0.813
Neut_0630
Hypothetical protein (403 aa)
   
  0.797
Neut_2492
Lipoprotein releasing system, transmembrane protein, LolC/E family protein (415 aa)
 
   
  0.742
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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