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STRINGSTRING
ABI58945.1 protein (Nitrosomonas eutropha) - STRING interaction network
"ABI58945.1" - PFAM: TrbL/VirB6 plasmid conjugal transfer protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI58945.1PFAM- TrbL/VirB6 plasmid conjugal transfer protein; KEGG- sfx-S2716 putative mating pair formation protein (475 aa)    
Predicted Functional Partners:
ABI58947.1
KEGG- sfx-S2718 putative mating pair formation protein (259 aa)
 
     
  0.964
ABI58944.1
annotation not available (82 aa)
              0.846
ABI58946.1
annotation not available (78 aa)
              0.846
ABI58948.1
KEGG- sfx-S2719 putative stabilization protein (62 aa)
 
          0.838
Neut_0675
KEGG- sfx-S2718 putative mating pair formation protein (259 aa)
 
     
  0.799
Neut_0678
Plasmid and phage replicative helicase; KEGG- sfx-S2721 putative DNA helicase (275 aa)
   
          0.779
ABI58950.1
KEGG- sfx-S2721 putative DNA helicase (275 aa)
   
          0.779
Neut_2578
KEGG- bms-BRA0372 TraJ protein (131 aa)
 
          0.777
Neut_0666
PFAM- Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG- sfx-S2707 resolvase (245 aa)
   
          0.709
ABI58938.1
PFAM- Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG- sfx-S2707 resolvase (245 aa)
   
          0.709
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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