• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0714 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0714" - Alpha amylase, catalytic region in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0714Alpha amylase, catalytic region; PFAM- glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART- alpha amylase, catalytic sub domain; KEGG- mac-MA3032 alpha-amylase (625 aa)    
Predicted Functional Partners:
glgC
Glucose-1-phosphate adenylyltransferase; Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (425 aa)
 
   
  0.954
Neut_2054
Alpha-glucan phosphorylase; KEGG- neu-NE0466 glycosyltransferase family 35; TIGRFAM- alpha-glucan phosphorylases; PFAM- glycosyl transferase, family 35 (851 aa)
 
 
  0.952
Neut_2291
KEGG- neu-NE0074 putative alpha-glucan phosphorylase, putative; TIGRFAM- alpha-glucan phosphorylases; PFAM- glycosyl transferase, family 35 (851 aa)
 
 
  0.948
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily (732 aa)
 
   
0.934
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (502 aa)
 
   
  0.920
Neut_1294
Alpha-amylase; PFAM- glycoside hydrolase, family 57; KEGG- neu-NE2032 glycosyl hydrolase family 57; Belongs to the glycosyl hydrolase 57 family (674 aa)
       
    0.902
Neut_0989
PFAM- alpha amylase, catalytic region; SMART- alpha amylase, catalytic sub domain; KEGG- aba-Acid345_4079 alpha amylase (494 aa)
 
   
  0.696
Neut_0713
Uncharacterized protein; KEGG- neu-NE1211 putative ABC transporter permease protein (125 aa)
              0.600
Neut_0715
Uncharacterized protein; KEGG- neu-NE1206 glutathione peroxidase (90 aa)
              0.561
Neut_2184
PFAM- phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG- dar-Daro_1444 phosphoglucomutase, alpha-D-glucose phosphate-specific (523 aa)
 
     
  0.518
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (13%) [HD]