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STRINGSTRING
Neut_0716 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0716" - TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0716TIGRFAM- TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1540 TonB-dependent receptor protein (697 aa)    
Predicted Functional Partners:
Neut_0717
PFAM- cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG- neu-NE1539 hypothetical protein (573 aa)
 
          0.689
Neut_1615
Outer membrane transport energization protein TonB; TIGRFAM- TonB family protein; PFAM- Gram-negative tonB protein; KEGG- neu-NE0354 possible TonB protein; TC 2.C.1.1.1 (240 aa)
   
 
  0.647
Neut_0497
TIGRFAM- TonB family protein; KEGG- neu-NE1626 putative TonB protein (276 aa)
   
 
  0.613
Neut_0718
KEGG- neu-NE1538 hypothetical protein (433 aa)
 
          0.602
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
           
  0.557
Neut_0103
KEGG- bxe-Bxe_A1200 hypothetical protein (193 aa)
       
      0.438
Neut_1741
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ppu-PP3575 outer membrane ferric siderophore receptor (709 aa)
 
 
  0.410
Neut_2092
PFAM- TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; KEGG- neu-NE2140 TonB-dependent receptor protein (765 aa)
   
   
  0.409
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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