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STRINGSTRING
Neut_0718 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0718" - KEGG: neu:NE1538 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0718KEGG- neu-NE1538 hypothetical protein (433 aa)    
Predicted Functional Partners:
Neut_0717
PFAM- cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG- neu-NE1539 hypothetical protein (573 aa)
 
          0.737
Neut_0716
TIGRFAM- TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1540 TonB-dependent receptor protein (697 aa)
 
          0.602
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
 
   
  0.588
Neut_2062
KEGG- neu-NE0458 hypothetical protein (698 aa)
   
          0.569
Neut_0178
KEGG- neu-NE0494 hypothetical protein (111 aa)
   
          0.552
Neut_1035
PFAM- phage integrase family protein; lipopolysaccharide biosynthesis; KEGG- neu-NE0588 phage integrase-chain length determinant protein (660 aa)
   
          0.545
Neut_1982
KEGG- neu-NE1342 possible glycosyltransferase (359 aa)
   
     
  0.541
Neut_1088
KEGG- neu-NE0790 hypothetical protein (166 aa)
   
          0.521
Neut_2119
PFAM- polysaccharide export protein; KEGG- neu-NE2279 polysaccharide export protein (405 aa)
   
 
  0.511
Neut_0891
PFAM- polysaccharide export protein; KEGG- neu-NE1805 putative polysaccharide export protein, outer membrane (205 aa)
   
 
  0.511
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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