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STRINGSTRING
Neut_0720 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0720" - PFAM: TonB-dependent receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0720PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1536 TonB-dependent receptor protein (829 aa)    
Predicted Functional Partners:
Neut_0719
PFAM- glycosyl hydrolase, BNR repeat-containing protein; KEGG- neu-NE1537 BNR repeat (413 aa)
 
          0.862
Neut_0723
KEGG- neu-NE1529 possible signal peptide protein (165 aa)
 
          0.766
Neut_1550
KEGG- neu-NE1571 hypothetical protein (467 aa)
   
        0.763
Neut_0722
KEGG- neu-NE1530 putative signal peptide protein (412 aa)
 
          0.753
Neut_0717
PFAM- cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG- neu-NE1539 hypothetical protein (573 aa)
 
          0.702
Neut_2463
KEGG- neu-NE1274 cytochrome c, class I (310 aa)
   
          0.700
Neut_1035
PFAM- phage integrase family protein; lipopolysaccharide biosynthesis; KEGG- neu-NE0588 phage integrase-chain length determinant protein (660 aa)
   
        0.686
Neut_1126
KEGG- neu-NE1841 hypothetical protein (150 aa)
   
          0.658
Neut_0227
PFAM- protein of unknown function DUF6, transmembrane; KEGG- neu-NE2464 integral membrane protein, DUF6 (298 aa)
   
          0.631
Neut_1615
Outer membrane transport energization protein TonB; TIGRFAM- TonB family protein; PFAM- Gram-negative tonB protein; KEGG- neu-NE0354 possible TonB protein; TC 2.C.1.1.1 (240 aa)
 
 
  0.610
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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