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STRINGSTRING
Neut_0721 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0721" - PFAM: TonB-dependent receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0721PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1531 TonB-dependent receptor protein (709 aa)    
Predicted Functional Partners:
Neut_2091
PFAM- FecR protein; KEGG- neu-NE2139 putative transmembrane sensor (320 aa)
 
 
  0.784
Neut_0722
KEGG- neu-NE1530 putative signal peptide protein (412 aa)
 
          0.744
Neut_0723
KEGG- neu-NE1529 possible signal peptide protein (165 aa)
 
          0.691
Neut_0374
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE2124 TonB-dependent receptor protein (736 aa)
 
     
  0.618
Neut_1741
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ppu-PP3575 outer membrane ferric siderophore receptor (709 aa)
 
     
  0.594
Neut_1732
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ava-Ava_B0148 TonB-dependent siderophore receptor (670 aa)
   
     
  0.548
Neut_1281
PFAM- iron permease FTR1; KEGG- rpd-RPD_3637 iron permease FTR1 (641 aa)
 
        0.520
Neut_1615
Outer membrane transport energization protein TonB; TIGRFAM- TonB family protein; PFAM- Gram-negative tonB protein; KEGG- neu-NE0354 possible TonB protein; TC 2.C.1.1.1 (240 aa)
   
 
  0.493
Neut_0497
TIGRFAM- TonB family protein; KEGG- neu-NE1626 putative TonB protein (276 aa)
   
 
  0.493
Neut_0719
PFAM- glycosyl hydrolase, BNR repeat-containing protein; KEGG- neu-NE1537 BNR repeat (413 aa)
 
          0.461
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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