STRINGSTRING
Neut_0723 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0723" - Putative signal peptide protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0723Putative signal peptide protein (165 aa)    
Predicted Functional Partners:
Neut_0722
Putative signal peptide protein (412 aa)
 
          0.979
Neut_0719
BNR repeat-containing glycosyl hydrolase (413 aa)
 
          0.891
Neut_0720
TonB-dependent receptor (829 aa)
 
          0.881
Neut_1126
Hypothetical protein (150 aa)
   
          0.741
Neut_0721
TonB-dependent receptor (709 aa)
              0.673
Neut_1035
Lipopolysaccharide biosynthesis (660 aa)
   
          0.567
Neut_0724
3-hydroxybutyryl-CoA epimerase (852 aa)
              0.540
Neut_2179
Hypothetical protein (190 aa)
   
          0.513
Neut_1175
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (507 aa)
   
          0.483
Neut_2373
Putative C4-dicarboxylate transporter (337 aa)
   
          0.473
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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