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ycgR protein (Nitrosomonas eutropha) - STRING interaction network
"ycgR" - YcgR family protein in Nitrosomonas eutropha
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Experiments
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[Homology]
Score
ycgRYcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (269 aa)    
Predicted Functional Partners:
Neut_0744
Flagellar motor switch protein FliG (331 aa)
   
 
  0.935
Neut_2056
Flagellar motor switch protein FliM (330 aa)
 
 
  0.929
fliE
Flagellar hook-basal body protein FliE (109 aa)
   
        0.802
Neut_0189
Flagellar motor protein MotB (314 aa)
 
      0.759
Neut_0741
Flagellar export protein FliJ (150 aa)
 
        0.737
Neut_1162
CheA signal transduction histidine kinase (1716 aa)
   
   
  0.734
Neut_0188
Flagellar motor protein MotA (286 aa)
 
 
  0.714
Neut_0746
PAS/PAC sensor signal transduction histidine kinase (414 aa)
 
          0.712
Neut_0751
Hypothetical protein (341 aa)
 
          0.708
Neut_2055
Flagellar basal body-associated protein FliL (160 aa)
 
 
  0.675
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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