STRINGSTRING
Neut_0772 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0772" - Phosphoribulokinase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0772Phosphoribulokinase (290 aa)    
Predicted Functional Partners:
cbbL
Ribulose bisophosphate carboxylase; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (473 aa)
 
   
  0.995
Neut_0805
Ribulose-bisphosphate carboxylase (108 aa)
 
   
  0.981
Neut_2096
Ribulose-phosphate 3-epimerase (226 aa)
       
  0.975
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (241 aa)
         
  0.912
Neut_1577
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (672 aa)
         
  0.675
Neut_0773
UvrD/REP helicase (748 aa)
              0.663
pgk
Phosphoglycerate kinase (392 aa)
         
  0.613
Neut_1578
Glyceraldehyde-3-phosphate dehydrogenase, type I (335 aa)
         
  0.613
Neut_0333
Glyceraldehyde-3-phosphate dehydrogenase, type I (335 aa)
         
  0.613
Neut_2321
Hydrolase (187 aa)
 
          0.610
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (6%) [HD]