STRINGSTRING
Neut_0777 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0777" - Hypothetical protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0777Hypothetical protein (239 aa)    
Predicted Functional Partners:
Neut_0778
DNA polymerase I (906 aa)
   
        0.836
Neut_0776
Hypothetical protein (126 aa)
              0.785
thrB
Homoserine kinase (316 aa)
              0.679
Neut_0209
Beta-lactamase domain-containing protein (468 aa)
   
        0.483
Neut_0779
Fatty acid desaturase (395 aa)
   
        0.477
Neut_2302
ABC transporter-like protein (240 aa)
   
        0.438
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (378 aa)
              0.428
Neut_2026
Outer membrane chaperone Skp (OmpH) (187 aa)
              0.428
Neut_0393
Peptidoglycan-binding LysM (342 aa)
              0.428
dapD
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (273 aa)
              0.428
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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