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STRINGSTRING
Neut_0841 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0841" - PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0841PFAM- peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG- neu-NE1574 serine protease, subtilase family; Belongs to the peptidase S8 family (706 aa)    
Predicted Functional Partners:
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
 
 
  0.699
Neut_1864
PFAM- peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG- neu-NE1183 serine protease, subtilase family (799 aa)
   
     
  0.608
Neut_0717
PFAM- cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG- neu-NE1539 hypothetical protein (573 aa)
   
          0.466
Neut_2101
PFAM- transcriptional regulator PadR family protein; Helix-turn-helix, type 11 domain protein; KEGG- neu-NE2153 hypothetical protein (219 aa)
   
          0.400
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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