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STRINGSTRING
Neut_0843 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0843" - PFAM: Uroporphyrin-III C/tetrapyrrole in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
Neut_0843PFAM- Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG- neu-NE1572 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase (244 aa)    
Predicted Functional Partners:
Neut_1519
PFAM- SirA family protein; KEGG- neu-NE1407 hypothetical protein; Belongs to the sulfur carrier protein TusA family (80 aa)
   
   
    0.911
apaG
PFAM- ApaG domain protein; KEGG- neu-NE1573 ApaG protein (127 aa)
              0.821
Neut_0498
PFAM- ribonuclease II; KEGG- neu-NE1625 ribonuclease II domain (619 aa)
   
          0.490
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (701 aa)
         
  0.447
plsX
Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA (339 aa)
   
        0.423
Neut_0543
TIGRFAM- DNA polymerase III, delta prime subunit; KEGG- neu-NE2180 putative DNA polymerase III (delta’ subunit) protein (354 aa)
 
        0.419
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (164 aa)
   
        0.402
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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