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STRINGSTRING
Neut_0870 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0870" - PFAM: NLP/P60 protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0870PFAM- NLP/P60 protein; KEGG- neu-NE2364 NLP/P60 (172 aa)    
Predicted Functional Partners:
Neut_1455
KEGG- hch-HCH_05649 hypothetical protein (927 aa)
   
   
  0.664
Neut_0343
Flagellar rod assembly protein/muramidase FlgJ; KEGG- neu-NE0310 mannosyl-glycoprotein endo-beta-N-acetylglucosamidases; TIGRFAM- flagellar rod assembly protein/muramidase FlgJ; PFAM- Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART- Lysozyme subfamily 2 (335 aa)
         
  0.575
glnS
Glutamine--tRNA ligase; KEGG- neu-NE2363 glutaminyl-tRNA synthetase; TIGRFAM- glutaminyl-tRNA synthetase; PFAM- glutamyl-tRNA synthetase, class Ic (565 aa)
              0.528
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
              0.418
Neut_2532
PFAM- Peptidoglycan-binding domain 1 protein; KEGG- neu-NE2573 putative periplasmic protein (561 aa)
       
      0.402
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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