STRINGSTRING
Neut_0880 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0880" - Hypothetical protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0880Hypothetical protein (390 aa)    
Predicted Functional Partners:
Neut_0881
Short-chain dehydrogenase/reductase SDR (248 aa)
              0.623
Neut_1162
CheA signal transduction histidine kinase (1716 aa)
           
  0.610
Neut_1854
Hypothetical protein (492 aa)
   
          0.596
Neut_0882
Transcriptional regulators, TraR/DksA family protein (135 aa)
 
          0.506
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (348 aa)
   
   
  0.486
Neut_0945
5’-methylthioadenosine phosphorylase (248 aa)
         
  0.467
Neut_0879
Beta-glucosidase (324 aa)
              0.441
Neut_0878
Beta-glucosidase (276 aa)
              0.441
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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