• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0881 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0881" - PFAM: short-chain dehydrogenase/reductase SDR in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0881PFAM- short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG- mst-Msp_0714 predicted short chain dehydrogenase (248 aa)    
Predicted Functional Partners:
Neut_2587
PFAM- aldehyde dehydrogenase; KEGG- bte-BTH_I0706 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family (478 aa)
     
 
  0.884
Neut_0700
PFAM- aldehyde dehydrogenase; KEGG- neu-NE2000 aldehyde dehydrogenase family (452 aa)
     
 
  0.884
Neut_0466
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (413 aa)
 
  0.627
Neut_0880
PFAM- protein of unknown function UPF0027; KEGG- noc-Noc_2009 hypothetical protein (390 aa)
              0.610
Neut_0882
Transcriptional regulator, TraR/DksA family protein; KEGG- noc-Noc_2010 C4-type zinc finger protein, DksA/TraR family (135 aa)
              0.556
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (147 aa)
   
 
  0.482
Neut_1549
N-acetylneuraminate synthase; PFAM- CBS domain containing protein; Xylose isomerase domain protein TIM barrel; N-acetylneuraminic acid synthase, N-terminal domain; KEGG- neu-NE1570 type III antifreeze protein-CBS domain-NeuB family (749 aa)
   
   
  0.449
Neut_1974
PFAM- short-chain dehydrogenase/reductase SDR; KEGG- neu-NE1333 short-chain dehydrogenase/reductase (SDR) superfamily; Belongs to the short-chain dehydrogenases/reductases (SDR) family (272 aa)
 
  0.415
Neut_0724
PFAM- Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG- neu-NE1528 putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein (852 aa)
   
 
  0.412
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (9%) [HD]