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STRINGSTRING
Neut_0908 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0908" - PFAM: peptidyl-tRNA hydrolase in Nitrosomonas eutropha
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Neut_0908PFAM- peptidyl-tRNA hydrolase; Mur ligase, middle domain protein; KEGG- pca-Pcar_0169 UDP-N-acetylmuramyl pentapeptide synthase-like (617 aa)    
Predicted Functional Partners:
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (359 aa)
 
   
  0.789
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
 
   
  0.775
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (598 aa)
 
   
  0.735
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family (273 aa)
         
  0.692
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (185 aa)
 
   
  0.675
Neut_1402
TIGRFAM- cyanophycin synthetase; PFAM- phosphoribosylglycinamide synthetase; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; RimK domain protein ATP-grasp; KEGG- neu-NE0923 cyanophycin synthetase (862 aa)
   
 
  0.663
Neut_0907
PFAM- peptidyl-tRNA hydrolase; Mur ligase, middle domain protein; KEGG- pca-Pcar_0169 UDP-N-acetylmuramyl pentapeptide synthase-like (630 aa)
 
       
0.655
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs; Belongs to the RNA methyltransferase TrmD family (281 aa)
   
   
  0.641
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (317 aa)
 
   
  0.614
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (343 aa)
 
 
  0.608
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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