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Neut_1008 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1008" - PFAM: ABC-2 type transporter in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1008PFAM- ABC-2 type transporter; KEGG- neu-NE1210 putative ABC transporter permease protein (382 aa)    
Predicted Functional Partners:
Neut_1009
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE1209 ATPase component ABC-type multidrug transport system (594 aa)
 
  0.992
Neut_1010
PFAM- secretion protein HlyD family protein; KEGG- neu-NE1208 HlyD family secretion protein (346 aa)
      0.988
Neut_1007
Transport permease protein; PFAM- ABC-2 type transporter; KEGG- neu-NE1211 putative ABC transporter permease protein (374 aa)
 
       
0.881
Neut_0713
Uncharacterized protein; KEGG- neu-NE1211 putative ABC transporter permease protein (125 aa)
   
          0.769
Neut_1011
PFAM- regulatory protein, TetR; KEGG- eba-ebA6247 transcriptional regulator, TetR family (202 aa)
              0.611
Neut_2509
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE2549 ATPase component ABC-type multidrug transport system (252 aa)
 
 
  0.545
Neut_1005
KEGG- xcb-XC_3476 hypothetical protein (300 aa)
 
          0.497
Neut_0856
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE2379 ATPase component ABC-type multidrug transport system (304 aa)
 
 
  0.451
Neut_1006
Rossmann fold nucleotide-binding protein-like protein; KEGG- rme-Rmet_1265 conserved hypothetical protein 730 (300 aa)
              0.421
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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