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Neut_1008 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1008" - ABC-2 type transporter in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1008ABC-2 type transporter (382 aa)    
Predicted Functional Partners:
Neut_1009
ABC transporter-like protein (594 aa)
  0.994
Neut_1010
Hypothetical protein (346 aa)
 
        0.980
Neut_1007
ABC-2 type transporter (374 aa)
 
   
0.926
Neut_2509
ABC transporter-like protein (252 aa)
  0.818
Neut_0713
Hypothetical protein (125 aa)
   
          0.773
Neut_0856
ABC transporter-like protein (304 aa)
 
  0.768
Neut_1011
Transcriptional regulator, TetR family protein (202 aa)
              0.629
Neut_1006
Hypothetical protein (300 aa)
              0.467
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (139 aa)
   
        0.461
Neut_2158
RND efflux system, outer membrane lipoprotein, NodT family protein (464 aa)
         
  0.445
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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