• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1011 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1011" - PFAM: regulatory protein, TetR in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1011PFAM- regulatory protein, TetR; KEGG- eba-ebA6247 transcriptional regulator, TetR family (202 aa)    
Predicted Functional Partners:
Neut_1935
PFAM- protein of unknown function DUF214; KEGG- tbd-Tbd_1360 ABC transporter permease protein (399 aa)
 
     
  0.795
Neut_1934
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- tbd-Tbd_1361 RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (383 aa)
 
     
  0.793
Neut_1936
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- tbd-Tbd_1359 ABC transporter ATPase (267 aa)
   
          0.777
Neut_1010
PFAM- secretion protein HlyD family protein; KEGG- neu-NE1208 HlyD family secretion protein (346 aa)
         
  0.622
Neut_1009
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE1209 ATPase component ABC-type multidrug transport system (594 aa)
   
   
  0.616
Neut_1008
PFAM- ABC-2 type transporter; KEGG- neu-NE1210 putative ABC transporter permease protein (382 aa)
              0.611
Neut_1007
Transport permease protein; PFAM- ABC-2 type transporter; KEGG- neu-NE1211 putative ABC transporter permease protein (374 aa)
              0.611
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
           
  0.546
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (382 aa)
       
 
  0.514
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (17%) [HD]