STRINGSTRING
Neut_1029 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1029" - Hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1029Hypothetical protein (494 aa)    
Predicted Functional Partners:
Neut_1681
Hypothetical protein (461 aa)
   
          0.769
Neut_1028
Sulfate ABC transporter, periplasmic sulfate-binding protein (335 aa)
              0.764
Neut_1027
Hypothetical protein (85 aa)
              0.759
Neut_2313
Copper resistance D domain-containing protein (714 aa)
   
          0.754
Neut_2279
Hypothetical protein (240 aa)
   
          0.731
Neut_0437
O-antigen polymerase (405 aa)
   
          0.707
Neut_0509
Hypothetical protein (281 aa)
   
          0.705
Neut_2522
Porin (413 aa)
   
          0.695
Neut_0510
Fimbrial assembly family protein (178 aa)
   
          0.639
Neut_1793
Hydroxylamine oxidase (570 aa)
   
          0.634
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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