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STRINGSTRING
Neut_1033 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1033" - KEGG: neu:NE0586 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1033KEGG- neu-NE0586 hypothetical protein (464 aa)    
Predicted Functional Partners:
Neut_1034
PFAM- GTP-binding protein, HSR1-related; KEGG- neu-NE0587 hypothetical protein (476 aa)
 
          0.967
Neut_2062
KEGG- neu-NE0458 hypothetical protein (698 aa)
   
          0.678
Neut_1553
PFAM- TENA/THI-4 domain protein; KEGG- neu-NE1434 putative coenzyme PQQ synthesis protein C, putative (246 aa)
   
          0.571
Neut_2093
KEGG- neu-NE2145 hypothetical protein (176 aa)
   
          0.565
Neut_0257
Transcriptional antiterminator, Rof; PFAM- Modulator of Rho-dependent transcription termination; KEGG- neu-NE0186 hypothetical protein (89 aa)
   
          0.538
Neut_1447
KEGG- neu-NE1157 hypothetical protein (287 aa)
   
          0.526
Neut_2085
PFAM- Peptidoglycan-binding domain 1 protein; KEGG- neu-NE2133 putative peptidoglycan binding domain 1 (194 aa)
   
        0.525
Neut_0313
KEGG- neu-NE0281 hypothetical protein (195 aa)
   
          0.517
Neut_1965
KEGG- neu-NE1882 hypothetical protein (427 aa)
   
          0.498
Neut_2522
PFAM- porin, Gram-negative type; KEGG- neu-NE2563 general diffusion gram-negative porins (413 aa)
   
          0.492
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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